緑地環境情報学研究室 Green Space & Environmental Informatics Lab.

研究業績

Publications

*責任著者

Original articles（過去10年）
  1. Nobuhiko Shigyo*, Keizo Hirai. (2026) Eight years of throughfall exclusion reshaped bacterial, fungal, and arbuscular mycorrhizal fungal communities in managed forest soil. Microbiology Resource Announcements XX:e00209-26. [link]
  2. Nobuhiko Shigyo*, Kiyoshi Umeki, Toshihide Hirao*. (2024) Soil microbial identity explains home-field advantage for litter decomposition. New Phytologist 243:2141–2156. [link]
  3. Nobuhiko Shigyo*, Koji Shichi, Kyoko Sugai, Setsuko Suzuki. (2023) Diversity profiling of soil bacterial and fungal communities in the Ogasawara (Bonin) Islands, Japan. Microbiology Resource Announcements 12:e00644-23. [link]
  4. Yoshiko Iida*, Kaoru Niiyama, Shin-ichiro Aiba, Hiroko Kurokawa, Shuntaro Kondo, Mana Mukai, Akira S. Mori, Satoshi Saito, Yi Sun, Kiyoshi Umeki. (2023) The trait-mediated trade-off between growth and survival depends on tree sizes and environmental conditions. Journal of Ecology 111:1777-1793. [link]
  5. Kohsuke Tanigawa, Yui Makino, Naoko Miura, Kiyoshi Umeki, Toshihide Hirao*. (2022) Scale-dependent habitat selection of sympatric mesocarnivore species in a cool temperate forest in eastern Japan. Mammalian Biology 102:1901-1910. [link]
  6. Nobuhiko Shigyo*, Hitomi Furusawa, Naoyuki Yamashita, Junko Nagakura, Takuya Manaka, Tsuyoshi Yamada, Keizo Hirai. (2022) Slope-induced factors shape bacterial communities in surface soils in a forested headwater catchment. CATENA 214:106253. [link]
  7. Toshihide Hirao*, Masanori Fujii, Nobuhiko Shigyo, Hisaya Kojima and Manabu Fukui. (2021) Influence of understory vegetation on soil bacterial communities and nitrogen cycling gene abundance in cool-temperate and sub-alpine forests along an elevational gradient. Pedobiologia 87-88:150746. [link]
  8. Nobuhiko Shigyo* and Toshihide Hirao. (2021) Saprotrophic and ectomycorrhizal fungi exhibit contrasting richness patterns along elevational gradients in cool-temperate montane forests. Fungal Ecology 50:101036. [link]
  9. 福地孝哉, 滝谷美香, 梅木清*. (2020) 航空機LiDARデータを用いたトドマツ人工林の上層樹高と地位指数の推定. 環境情報科学論文集 34:151-155. [link]
  10. 牧野結衣, 平尾聡秀, 梅木清*. (2020) 奥秩父山地におけるシカ不嗜好性植物2種の分布域拡大過程. 環境情報科学論文集 34:156-161. [link]
  11. Kiyoshi Umeki*, Marc David Abrams, Keisuke Toyama, Eri Nabeshima. (2019) A model for longitudinal data sets relating wind-damage probability to biotic and abiotic factors: a Bayesian approach. Forest Systems e019-2019. [link]
  12. Nobuhiko Shigyo*, Kiyoshi Umeki and Toshihide Hirao. (2019) Seasonal dynamics of soil fungal and bacterial communities in cool-temperate montane forests. Frontiers in Microbiology 10:1941. [link]
  13. Maki Suzuki*, Kiyoshi Umeki, Olga Orman, Mitsue Shibata, Hiroshi Tanaka, Shigeo Iida, Tohru Nakashizuka, Takashi Masaki. (2019) When and why do trees begin to decrease their resource allocation to apical growth? The importance of the reproductive onset. Oecologia 191:39-49. [link]
  14. Nobuhiko Shigyo*, Kiyoshi Umeki, Toshihide Hirao. (2019) Plant functional diversity and soil properties control elevational diversity gradients of soil bacteria. FEMS Microbiology Ecology 95:fiz025. [link]
  15. Kiyoshi Umeki*, Mitsuru Kawasaki, Nobuhiko Shigyo, Toshihide Hirao. (2018) Inter- and intraspecific patterns in resprouting of trees in undisturbed natural forests along an elevational gradient in central Japan. Forests 9:672. [link]
  16. Marc D. Abrams*, Kiyoshi Umeki, Christopher Bouma, Eri Nabeshima, Keisuke Toyama. (2017) A dendroecological analysis of forest dynamics for old-growth Abies-Tsuga-Quercus on the Boso peninsula, southeastern Japan. Tree-Ring Research 73:59-74. [link]
  17. Nobuhiko Shigyo*, Kiyoshi Umeki, Haruka Ohashi, Kiyokazu Kawada, Toshihide Hirao. (2017) Phylogenetic constraints to soil properties determine elevational diversity gradients of forest understory vegetation. Plant Ecology 218:821–834. [link]
  18. Nobumitsu Tsunematsu*, Hitoshi Yokoyama, Tsuyoshi Honjo, Arata Ichihashi, Haruo Ando, Nobuhiko Shigyo. (2016) Relationship between land use/cover variations and amounts of thermal infrared energy emitted from urban surfaces in downtown Tokyo on hot summer days. Urban Climate 17:67–79. [link]
  19. Tsuyoshi Honjo*, Nobumitsu Tsunematsu, Hitoshi Yokoyama, Yudai Yamasaki, Kiyoshi Umeki. (2017) Analysis of urban surface temperature change using structure-from-motion thermal mosaicing. Urban Climate 20:135-147. [link]
  20. Masae Iwamoto Ishihara*, Yasuo Konno, Kiyoshi Umeki, Yasuyuki Ohno, Kihachiro Kikuzawa. (2016) A new model for size-dependent tree growth in forests. PLoS One e0152219. [link]
  21. 山﨑雄大, 常松展充, 横山仁, 梅木清, 本條毅*. (2016) 温熱快適感マップの作成と夏季マラソンコースの温熱環境予測. 環境情報科学論文集 30:43-48. [link]
  22. 小島倫直, 本條毅, 梅木清*. (2016) 樹木モデルを用いた植物個体光合成量の計算手法. ランドスケープ研究 79:693-696. [link]
Misc
  1. 執行宣彦. (2026) IUFRO Task Force T58「The Impact of Biodiversity on Carbon Related Ecosystem Services Provided by Soils of Managed Forests」の紹介. IUFRO-J NEWS 139:1-3. [link]
  2. Nobuhiko Shigyo. (2025) Preparation of long rDNA amplicons of arbuscular mycorrhizal fungi (Glomeromycota) from soil and root DNA for high-fidelity long-read sequencing. protocols.io. [link]
  3. 梅木清, 彦坂晶子, 椎名武夫. (2023) 先端園芸工学講座. 食と緑の科学. [link]
  4. Nobuhiko Shigyo. (2022) Accurate profiling of diazotrophic communities using unique molecular identifiers with Nanopore sequencing. protocols.io. [link]
  5. 執行宣彦, 梅木清, 平尾聡秀. (2017) 東京大学秩父演習林における標高に沿った土壌特性と環境要因の関係. 演習林 59:223–233. [link]